Variability of phytoplasma associated with few ornamental crop species in Uttar Pradesh,India

Abstract

The economic importance of ornamentals has been advancing significantly in many countries due to continuous international demand. Like other crops, ornamental plants are also affected by a number of pathogens and the phytoplasmas diseases are equally important group of pathogens which is responsible for damaging the different ornamental plant species and thereby affecting their market value. In the present investigation, total 24 symptomatic leaf samples of 8 ornamental plant species (C. roseus, R. rubiginosa, C. variegatum, Z. elegans, J. gendurusa, T. erecta, H. rosa sinensis, J. sambrac) were analyzed which were found positive in nested PCR assays with R16F2n/R16R2 primers. The phytoplasma associated with ornamental plant species collected from different districts of UP in the present investigation are belongs to 16Sr I, II, VI and XIV group.     

Minority of mammalian orthologs can be regarded as physiologically closest genes

Orthologs are genes from different genomes that originate from a common ancestor gene by speciation event. They are most similar by the structure of encoded proteins and therefore should have a similar function. Here I apply the principle used for detection of structural orthology for a genome-wide analysis of gene expression. For this purpose, I determine the mutual similarity rank in all-by-all comparison of among-tissues expression patterns. The expression of most part of human–mouse orthologs in homologous tissues is poorly correlated (average mutual coexpression rank is only 4835 out of 18,092). Genes from evolutionarily labile gene families, which experience rapid turnover of family composition, are among those with the strongest expression change. However, the revealed phenomenon is not limited to them. There is no or very weak relationship between protein sequence divergence and mutual coexpression rank. Also, generally there is no relationship between the ratio of nonsynonymous to synonymous nucleotide substitutions and coexpression rank. This relationship is tangible only within evolutionarily labile gene families. These results indicate that despite of a similar biochemical function of orthologs reflected in the conserved protein sequence, the physiological (systemic) context of this function can be changed. Also, these results suggest that gene biochemical function and its physiological role in the organism can evolve independently.     

Implicit associations with social status: the effects of relationship involvement

The study tested the proposition that relationship involvement influences the implicit responses of women to high- and low-status professions. It was hypothesized that when a high-involvement context was primed, women would have more positive implicit associations with high-status occupations than when a low-involvement context was primed. In contrast, when a high-involvement context was primed, women would have more negative associations with low-status occupations than when a low-involvement context was primed. To test the hypothesis, 123 female participants received a high or low relationship involvement prime. Then the participants completed a single category implicit associations test designed to measure the participants' associations with either high- or low-status occupations. As predicted, the relationship involvement prime influenced the positivity of associations made with high- and low-status occupations. The study pointed to the possibility that persons possess evolutionary-based implicit associations.     

Systematics of the spider genera Mallos and Mexitlia (Araneae, Dictynidae)

This systematic study recognizes and describes 14 species of the genus Mallos O. Pickard-Cambridge, 1902 and three species of the genus Mexitlia Lehtinen, 1967. Three species of Mallos – Mallos gertschi, Mallos chamberlini and Mallos macrolirus –and one species of Mexitlia – Mexitlia altima –are newly described. Mallos ghiggi (Caporiacco, 1938) is considered a synonym of Mexitlia grandis (O. Pickard-Cambridge, 1896). Mexitlia grandis is considered the senior synonym of Mexitlia avara (Banks, 1898). Two species, Mallos jlavovittatus (Keyserling, 1880) and Mallos nigrescens (Caporiacco, 1955) are removed from Mallos. The males of Mallos kraussi Gertsch, 1946 and Mallos blandus Chamberlin and Gertsch 1958, are described for the first time. A cladistic analysis based on 26 morphological characters produced a cladogram that supports the monophyly of Mallos and the validity of Mexitlia. This cladogram presents a phylogenetic framework for considering the evolution of social behaviour in Mallos.     

中国龙脑香科植物受胁状况及迁地群落保护探讨

广义的龙脑香科植物是泛热带分布,中国有5属13种,其中1种为引种栽培,仅分布于云南、广西、海南和西藏。许多龙脑香科植物具有很高的经济价值。由于近年来各地森林遭受强度破坏,加之其自身特殊的生物生态学特征和种子生物学特性,大多数种类的生存受到严重威胁。该文主要介绍中国龙脑香科植物目前的受威胁状况、具体保护研究工作及其不足,并提出了进行迁地群落建设的保护策略。     

新基因水稻 OsLSD1 的克隆及拟南芥和水稻类 LSD1 基因家族的生物信息学分析

类 LSD1 (LSD1-like) 基因家族是一类特殊的 C2C2 型锌指蛋白基因,编码植物特有的转录因子 . 目前已经研究的 2 个成员拟南芥 LSD1 (lesions stimulating disease resistance 1) 和 LOL1 (LSD-One-Like 1) 基因均参与植物细胞程序化死亡 (programmed cell death, PCD) 的调控 . 从水稻 cDNA 文库中克隆到 1 个类 LSD1 基因,命名为 OsLSD1. 该基因长 988 bp ,包含一个 432 bp 的开放阅读框,推导的氨基酸序列 (143 个氨基酸 ) 含有 3 个内部保守的锌指结构域 . DNA 印迹结果表明 OsLSD1 基因在水稻基因组中为单拷贝,且在根、茎和叶中表达 . 借助于生物信息学分析技术,从拟南芥和水稻数据库中各识别出 5 个和 7 个 ( 包括 OsLSD1) 类 LSD1 基因 . 分析了这些类 LSD1 基因的结构,蛋白质结构域组成 . 系统进化分析表明,无论基于编码区的核苷酸或氨基酸序列都可以将这些类 LSD1 基因分为 2 类 . 虽然不存在拟南芥或水稻特有的类 LSD1 蛋白,但有些结构域是水稻所特有的,也有些基因是来源于复制事件 .     

系统发生分析发现牛病毒性腹泻病病毒新基因亚型

本研究对我国首次分离获得的牛源牛病毒性腹泻病毒(BVDV)毒株Changchun 184(CC-184)和猪源牛病毒 性腹泻病毒ZM-95进行了遗传衍化关系研究。选择主要抗原E2基因为研究对象,首先应用RT-PCR及套式PCR 克隆得到CC-184和ZM-95的E2片段,通过序列测定发现CC-184和ZM-95 E2基因长度分别为1,122bp和1, 125bp,各自编码374和375个氨基酸残基。核酸序列同源性比较和系统发生分析表明2株病毒均属于BVDV-1, CC-184与Osloss亲缘关系最近,都属于已有的b基因亚型,其E2基因同源性达91．8％。而ZM-95的E2基因有 一个特征性的变异区,包含一个密码子序列插入,这一变异区编码了一段有别于其他瘟病毒的五肽氨基酸序列 HYKKK。结果还表明ZM-95与BVDV-1现有的5个基因亚型的亲缘关系均较远,E2基因同源性最高(与Oregon c24v)只有72．4％。而BVDV-1亚型内毒株间的同源性大于85％,亚型间的同源性在69％～75％之间,充分说明 ZM-95是BVDV-1中一个新发现的基因亚型。通常认为猪源BVDV来源于牛,应该与牛源BVDV有十分近的遗 传关系,但是本研究发现ZM-95与其他已知牛源BVDV较低的基因同源性说明猪源BVDV还具有独立的遗传衍 化与传播来源的可能性。